Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brf2Q3UAW9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Gm8655-201ENSMUST00000221159 852 ntBASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brf2Q3UAW9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Brf2Q3UAW9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Brf2Q3UAW9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Brf2Q3UAW9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Brf2Q3UAW9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Brf2Q3UAW9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Brf2Q3UAW9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Brf2Q3UAW9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms