Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lins1Q3U1D0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lins1Q3U1D0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lins1Q3U1D0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lins1Q3U1D0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lins1Q3U1D0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lins1Q3U1D0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lins1Q3U1D0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lins1Q3U1D0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lins1Q3U1D0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Lins1Q3U1D0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lins1Q3U1D0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lins1Q3U1D0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Asic1-205ENSMUST00000228185 1818 ntBASIC18.33■□□□□ 0.52
Lins1Q3U1D0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.32■□□□□ 0.52
Lins1Q3U1D0 Grk6-207ENSMUST00000225925 2769 ntBASIC18.31■□□□□ 0.52
Lins1Q3U1D0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lins1Q3U1D0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Lins1Q3U1D0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Lins1Q3U1D0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lins1Q3U1D0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lins1Q3U1D0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lins1Q3U1D0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lins1Q3U1D0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.31■□□□□ 0.52
Lins1Q3U1D0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms