Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctdnep1Q3TP92 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctdnep1Q3TP92 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ctdnep1Q3TP92 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Gm6089-201ENSMUST00000197666 938 ntBASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctdnep1Q3TP92 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Gm25990-201ENSMUST00000102440 86 ntBASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Gm5682-201ENSMUST00000173402 505 ntBASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctdnep1Q3TP92 Efs-202ENSMUST00000227037 2540 ntBASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctdnep1Q3TP92 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctdnep1Q3TP92 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctdnep1Q3TP92 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.8■□□□□ 0.44
Ctdnep1Q3TP92 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctdnep1Q3TP92 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms