Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.29■□□□□ 0.36
Pdlim7Q3TJD7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim7Q3TJD7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim7Q3TJD7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim7Q3TJD7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pdlim7Q3TJD7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim7Q3TJD7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim7Q3TJD7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pdlim7Q3TJD7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim7Q3TJD7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim7Q3TJD7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Gm14127-201ENSMUST00000117906 678 ntBASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Mir7684-201ENSMUST00000183858 60 ntBASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pdlim7Q3TJD7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim7Q3TJD7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Gm13453-201ENSMUST00000118708 357 ntBASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim7Q3TJD7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Gm10499-201ENSMUST00000174094 934 ntBASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pdlim7Q3TJD7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms