Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Gm27704-201ENSMUST00000185094 107 ntBASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trappc13Q3TIR1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Gm15165-201ENSMUST00000118140 502 ntBASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trappc13Q3TIR1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc13Q3TIR1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms