Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 Gm27847-201ENSMUST00000183711 107 ntBASIC13.73□□□□□ -0.21
Chd8Q09XV5 Gm27375-201ENSMUST00000183799 107 ntBASIC13.73□□□□□ -0.21
Chd8Q09XV5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd8Q09XV5 AA619741-201ENSMUST00000195095 646 ntBASIC13.73□□□□□ -0.21
Chd8Q09XV5 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.73□□□□□ -0.21
Chd8Q09XV5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.72□□□□□ -0.21
Chd8Q09XV5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Gm7561-201ENSMUST00000211203 886 ntBASIC13.72□□□□□ -0.21
Chd8Q09XV5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd8Q09XV5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Chd8Q09XV5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd8Q09XV5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chd8Q09XV5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Chd8Q09XV5 Mir877-201ENSMUST00000104738 85 ntBASIC13.71□□□□□ -0.22
Chd8Q09XV5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.71□□□□□ -0.22
Chd8Q09XV5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.71□□□□□ -0.22
Chd8Q09XV5 Proscos-202ENSMUST00000178990 666 ntBASIC13.71□□□□□ -0.22
Chd8Q09XV5 Gm27516-201ENSMUST00000184237 98 ntBASIC13.71□□□□□ -0.22
Chd8Q09XV5 Gm43822-201ENSMUST00000200285 476 ntBASIC13.71□□□□□ -0.22
Chd8Q09XV5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.71□□□□□ -0.22
Chd8Q09XV5 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.71□□□□□ -0.22
Chd8Q09XV5 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.71□□□□□ -0.22
Chd8Q09XV5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.7□□□□□ -0.22
Chd8Q09XV5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chd8Q09XV5 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.7□□□□□ -0.22
Chd8Q09XV5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd8Q09XV5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.69□□□□□ -0.22
Chd8Q09XV5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.69□□□□□ -0.22
Chd8Q09XV5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms