Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Col17a1Q07563 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Col17a1Q07563 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col17a1Q07563 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col17a1Q07563 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col17a1Q07563 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Col17a1Q07563 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC23.49■■□□□ 1.35
Col17a1Q07563 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC23.49■■□□□ 1.35
Col17a1Q07563 Gm5370-201ENSMUST00000187187 574 ntBASIC23.49■■□□□ 1.35
Col17a1Q07563 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col17a1Q07563 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col17a1Q07563 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col17a1Q07563 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col17a1Q07563 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col17a1Q07563 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col17a1Q07563 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col17a1Q07563 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col17a1Q07563 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC23.49■■□□□ 1.35
Col17a1Q07563 Gm27341-201ENSMUST00000183570 106 ntBASIC23.49■■□□□ 1.35
Col17a1Q07563 Gm27501-201ENSMUST00000183599 107 ntBASIC23.49■■□□□ 1.35
Col17a1Q07563 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC23.49■■□□□ 1.35
Col17a1Q07563 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC23.49■■□□□ 1.35
Col17a1Q07563 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC23.49■■□□□ 1.35
Col17a1Q07563 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col17a1Q07563 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col17a1Q07563 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col17a1Q07563 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col17a1Q07563 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col17a1Q07563 Gm11814-201ENSMUST00000119515 929 ntBASIC23.48■■□□□ 1.35
Col17a1Q07563 Gm22902-201ENSMUST00000158488 302 ntBASIC23.48■■□□□ 1.35
Col17a1Q07563 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC23.48■■□□□ 1.35
Col17a1Q07563 Gm2495-201ENSMUST00000191160 466 ntBASIC23.48■■□□□ 1.35
Col17a1Q07563 Gm8463-201ENSMUST00000208573 613 ntBASIC23.48■■□□□ 1.35
Col17a1Q07563 Gm7446-201ENSMUST00000221035 1240 ntBASIC23.48■■□□□ 1.35
Col17a1Q07563 Gm6091-201ENSMUST00000098307 165 ntBASIC23.48■■□□□ 1.35
Col17a1Q07563 AC154527.2-201ENSMUST00000225256 1466 ntBASIC23.48■■□□□ 1.35
Col17a1Q07563 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col17a1Q07563 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC23.47■■□□□ 1.35
Col17a1Q07563 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Col17a1Q07563 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Col17a1Q07563 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col17a1Q07563 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC23.46■■□□□ 1.35
Col17a1Q07563 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 Gm9299-201ENSMUST00000206392 1140 ntBASIC23.46■■□□□ 1.35
Col17a1Q07563 Gm45930-201ENSMUST00000221330 292 ntBASIC23.46■■□□□ 1.35
Col17a1Q07563 AC134335.2-201ENSMUST00000227660 440 ntBASIC23.46■■□□□ 1.35
Col17a1Q07563 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 Dctn4-202ENSMUST00000223590 1530 ntBASIC23.46■■□□□ 1.35
Col17a1Q07563 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 Gm37194-201ENSMUST00000193092 3031 ntBASIC23.46■■□□□ 1.35
Col17a1Q07563 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col17a1Q07563 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC23.45■■□□□ 1.35
Col17a1Q07563 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col17a1Q07563 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col17a1Q07563 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col17a1Q07563 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Col17a1Q07563 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col17a1Q07563 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col17a1Q07563 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col17a1Q07563 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm29310-201ENSMUST00000185468 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21825-201ENSMUST00000185728 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm29109-201ENSMUST00000185895 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21896-201ENSMUST00000186520 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21873-201ENSMUST00000186728 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21794-201ENSMUST00000187056 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21880-201ENSMUST00000187275 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21826-201ENSMUST00000187451 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21198-201ENSMUST00000188393 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21749-201ENSMUST00000189343 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21901-201ENSMUST00000189568 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm29424-201ENSMUST00000189716 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm28599-201ENSMUST00000189838 694 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21867-201ENSMUST00000189917 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm29269-201ENSMUST00000190087 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21722-201ENSMUST00000190153 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm28423-201ENSMUST00000190701 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21899-201ENSMUST00000190745 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21910-201ENSMUST00000191163 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm21849-201ENSMUST00000191571 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm28678-201ENSMUST00000191593 696 ntBASIC23.45■■□□□ 1.34
Col17a1Q07563 Gm20910-201ENSMUST00000193268 696 ntBASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms