Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox4Q06831 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.18■□□□□ 0.02
Sox4Q06831 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox4Q06831 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox4Q06831 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox4Q06831 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox4Q06831 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox4Q06831 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Sox4Q06831 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sox4Q06831 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.17■□□□□ 0.02
Sox4Q06831 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Gm14722-201ENSMUST00000118943 689 ntBASIC15.17■□□□□ 0.02
Sox4Q06831 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.17■□□□□ 0.02
Sox4Q06831 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.17■□□□□ 0.02
Sox4Q06831 Gm18489-201ENSMUST00000172565 551 ntBASIC15.17■□□□□ 0.02
Sox4Q06831 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.17■□□□□ 0.02
Sox4Q06831 Gm9682-201ENSMUST00000197505 556 ntBASIC15.17■□□□□ 0.02
Sox4Q06831 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.17■□□□□ 0.02
Sox4Q06831 Gm18206-201ENSMUST00000207027 926 ntBASIC15.17■□□□□ 0.02
Sox4Q06831 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.17■□□□□ 0.02
Sox4Q06831 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox4Q06831 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sox4Q06831 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox4Q06831 Dancr-204ENSMUST00000132389 2347 ntBASIC15.16■□□□□ 0.02
Sox4Q06831 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sox4Q06831 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sox4Q06831 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.16■□□□□ 0.02
Sox4Q06831 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.16■□□□□ 0.02
Sox4Q06831 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox4Q06831 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Gm6443-201ENSMUST00000203599 874 ntBASIC15.16■□□□□ 0.02
Sox4Q06831 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sox4Q06831 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox4Q06831 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.15■□□□□ 0.02
Sox4Q06831 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox4Q06831 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox4Q06831 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox4Q06831 Gm4899-201ENSMUST00000178708 719 ntBASIC15.15■□□□□ 0.02
Sox4Q06831 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.15■□□□□ 0.02
Sox4Q06831 Gm5364-201ENSMUST00000216789 889 ntBASIC15.15■□□□□ 0.02
Sox4Q06831 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sox4Q06831 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox4Q06831 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox4Q06831 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox4Q06831 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox4Q06831 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox4Q06831 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sox4Q06831 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Sox4Q06831 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox4Q06831 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sox4Q06831 Gm8318-201ENSMUST00000182954 872 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms