Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.24■□□□□ 0.67
Col1a2Q01149 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.24■□□□□ 0.67
Col1a2Q01149 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col1a2Q01149 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col1a2Q01149 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col1a2Q01149 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.23■□□□□ 0.67
Col1a2Q01149 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col1a2Q01149 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.23■□□□□ 0.67
Col1a2Q01149 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.23■□□□□ 0.67
Col1a2Q01149 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col1a2Q01149 Gm18057-201ENSMUST00000208220 503 ntBASIC19.23■□□□□ 0.67
Col1a2Q01149 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.23■□□□□ 0.67
Col1a2Q01149 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col1a2Q01149 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col1a2Q01149 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col1a2Q01149 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col1a2Q01149 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Col1a2Q01149 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col1a2Q01149 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col1a2Q01149 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Col1a2Q01149 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
Col1a2Q01149 Gm16026-204ENSMUST00000162652 683 ntBASIC19.22■□□□□ 0.67
Col1a2Q01149 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.22■□□□□ 0.67
Col1a2Q01149 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.22■□□□□ 0.67
Col1a2Q01149 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.22■□□□□ 0.67
Col1a2Q01149 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Col1a2Q01149 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col1a2Q01149 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Col1a2Q01149 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.21■□□□□ 0.67
Col1a2Q01149 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 Gm6973-201ENSMUST00000117080 721 ntBASIC19.21■□□□□ 0.67
Col1a2Q01149 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.21■□□□□ 0.67
Col1a2Q01149 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.21■□□□□ 0.67
Col1a2Q01149 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.21■□□□□ 0.67
Col1a2Q01149 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.21■□□□□ 0.67
Col1a2Q01149 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.21■□□□□ 0.67
Col1a2Q01149 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.21■□□□□ 0.67
Col1a2Q01149 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.21■□□□□ 0.67
Col1a2Q01149 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col1a2Q01149 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.21■□□□□ 0.67
Col1a2Q01149 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col1a2Q01149 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.2■□□□□ 0.66
Col1a2Q01149 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.2■□□□□ 0.66
Col1a2Q01149 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.2■□□□□ 0.66
Col1a2Q01149 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Col1a2Q01149 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.2■□□□□ 0.66
Col1a2Q01149 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col1a2Q01149 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col1a2Q01149 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col1a2Q01149 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.2■□□□□ 0.66
Col1a2Q01149 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col1a2Q01149 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col1a2Q01149 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col1a2Q01149 Gm22065-201ENSMUST00000103753 110 ntBASIC19.19■□□□□ 0.66
Col1a2Q01149 Gm22066-201ENSMUST00000103761 110 ntBASIC19.19■□□□□ 0.66
Col1a2Q01149 Gm24932-201ENSMUST00000103763 110 ntBASIC19.19■□□□□ 0.66
Col1a2Q01149 Gm24115-201ENSMUST00000103799 110 ntBASIC19.19■□□□□ 0.66
Col1a2Q01149 Gm22190-201ENSMUST00000103827 110 ntBASIC19.19■□□□□ 0.66
Col1a2Q01149 Gm22191-201ENSMUST00000103831 110 ntBASIC19.19■□□□□ 0.66
Col1a2Q01149 Gm24721-201ENSMUST00000103849 110 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms