Protein–RNA interactions for Protein: P97468

Cmklr1, Chemokine-like receptor 1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmklr1P97468 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.28□□□□□ -0.12
Cmklr1P97468 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cmklr1P97468 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.28□□□□□ -0.12
Cmklr1P97468 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cmklr1P97468 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cmklr1P97468 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cmklr1P97468 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cmklr1P97468 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cmklr1P97468 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cmklr1P97468 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Cmklr1P97468 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cmklr1P97468 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.27□□□□□ -0.12
Cmklr1P97468 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cmklr1P97468 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cmklr1P97468 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.27□□□□□ -0.12
Cmklr1P97468 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Cmklr1P97468 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cmklr1P97468 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cmklr1P97468 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cmklr1P97468 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cmklr1P97468 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cmklr1P97468 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cmklr1P97468 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cmklr1P97468 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cmklr1P97468 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cmklr1P97468 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.27□□□□□ -0.13
Cmklr1P97468 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.27□□□□□ -0.13
Cmklr1P97468 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.27□□□□□ -0.13
Cmklr1P97468 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cmklr1P97468 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.26□□□□□ -0.13
Cmklr1P97468 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cmklr1P97468 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cmklr1P97468 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.26□□□□□ -0.13
Cmklr1P97468 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Cmklr1P97468 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cmklr1P97468 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cmklr1P97468 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cmklr1P97468 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cmklr1P97468 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cmklr1P97468 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.25□□□□□ -0.13
Cmklr1P97468 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Gm28033-201ENSMUST00000184224 96 ntBASIC14.25□□□□□ -0.13
Cmklr1P97468 Gm27741-201ENSMUST00000185060 237 ntBASIC14.25□□□□□ -0.13
Cmklr1P97468 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.25□□□□□ -0.13
Cmklr1P97468 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cmklr1P97468 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cmklr1P97468 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms