Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx1P63006 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.16■□□□□ 0.02
Lhx1P63006 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.16■□□□□ 0.02
Lhx1P63006 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx1P63006 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx1P63006 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.16■□□□□ 0.02
Lhx1P63006 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.16■□□□□ 0.02
Lhx1P63006 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx1P63006 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lhx1P63006 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lhx1P63006 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx1P63006 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Lhx1P63006 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Lhx1P63006 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx1P63006 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx1P63006 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lhx1P63006 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lhx1P63006 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.15■□□□□ 0.02
Lhx1P63006 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lhx1P63006 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.15■□□□□ 0.02
Lhx1P63006 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.15■□□□□ 0.02
Lhx1P63006 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Lhx1P63006 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.15■□□□□ 0.02
Lhx1P63006 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.15■□□□□ 0.02
Lhx1P63006 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Lhx1P63006 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.15■□□□□ 0.02
Lhx1P63006 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx1P63006 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lhx1P63006 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Lhx1P63006 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.14■□□□□ 0.01
Lhx1P63006 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lhx1P63006 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.14■□□□□ 0.01
Lhx1P63006 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lhx1P63006 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.14■□□□□ 0.01
Lhx1P63006 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.14■□□□□ 0.01
Lhx1P63006 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.14■□□□□ 0.01
Lhx1P63006 Gm14494-201ENSMUST00000118786 435 ntBASIC15.14■□□□□ 0.01
Lhx1P63006 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.14■□□□□ 0.01
Lhx1P63006 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.14■□□□□ 0.01
Lhx1P63006 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.14■□□□□ 0.01
Lhx1P63006 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.14■□□□□ 0.01
Lhx1P63006 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx1P63006 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lhx1P63006 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Lhx1P63006 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.13■□□□□ 0.01
Lhx1P63006 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lhx1P63006 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
Lhx1P63006 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.13■□□□□ 0.01
Lhx1P63006 Gm2213-201ENSMUST00000197485 688 ntBASIC15.13■□□□□ 0.01
Lhx1P63006 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lhx1P63006 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.13■□□□□ 0.01
Lhx1P63006 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.13■□□□□ 0.01
Lhx1P63006 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Lhx1P63006 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms