Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.15■□□□□ 0.5
Lrch1P62046 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.15■□□□□ 0.5
Lrch1P62046 Gm13015-201ENSMUST00000118674 204 ntBASIC18.15■□□□□ 0.5
Lrch1P62046 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.15■□□□□ 0.5
Lrch1P62046 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Lrch1P62046 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrch1P62046 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.14■□□□□ 0.49
Lrch1P62046 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Gm14722-201ENSMUST00000118943 689 ntBASIC18.14■□□□□ 0.49
Lrch1P62046 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Gm16026-204ENSMUST00000162652 683 ntBASIC18.14■□□□□ 0.49
Lrch1P62046 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lrch1P62046 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.14■□□□□ 0.49
Lrch1P62046 Gm27680-201ENSMUST00000184192 160 ntBASIC18.14■□□□□ 0.49
Lrch1P62046 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lrch1P62046 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lrch1P62046 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.14■□□□□ 0.49
Lrch1P62046 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.14■□□□□ 0.49
Lrch1P62046 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.14■□□□□ 0.49
Lrch1P62046 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lrch1P62046 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.13■□□□□ 0.49
Lrch1P62046 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.13■□□□□ 0.49
Lrch1P62046 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lrch1P62046 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Lrch1P62046 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.13■□□□□ 0.49
Lrch1P62046 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Lrch1P62046 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.13■□□□□ 0.49
Lrch1P62046 Gm27838-201ENSMUST00000184829 128 ntBASIC18.13■□□□□ 0.49
Lrch1P62046 Gm18049-201ENSMUST00000208909 581 ntBASIC18.13■□□□□ 0.49
Lrch1P62046 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.13■□□□□ 0.49
Lrch1P62046 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.13■□□□□ 0.49
Lrch1P62046 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lrch1P62046 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lrch1P62046 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lrch1P62046 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.12■□□□□ 0.49
Lrch1P62046 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.12■□□□□ 0.49
Lrch1P62046 Gm7775-201ENSMUST00000218871 853 ntBASIC18.12■□□□□ 0.49
Lrch1P62046 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.12■□□□□ 0.49
Lrch1P62046 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.12■□□□□ 0.49
Lrch1P62046 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.12■□□□□ 0.49
Lrch1P62046 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.12■□□□□ 0.49
Lrch1P62046 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.12■□□□□ 0.49
Lrch1P62046 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.12■□□□□ 0.49
Lrch1P62046 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrch1P62046 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lrch1P62046 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms