Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Sf3b6P59708 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sf3b6P59708 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.74□□□□□ -0.21
Sf3b6P59708 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.74□□□□□ -0.21
Sf3b6P59708 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sf3b6P59708 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sf3b6P59708 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.74□□□□□ -0.21
Sf3b6P59708 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Sf3b6P59708 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Sf3b6P59708 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sf3b6P59708 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.73□□□□□ -0.21
Sf3b6P59708 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.73□□□□□ -0.21
Sf3b6P59708 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.73□□□□□ -0.21
Sf3b6P59708 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3b6P59708 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sf3b6P59708 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Gm10052-201ENSMUST00000168019 960 ntBASIC13.72□□□□□ -0.21
Sf3b6P59708 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Gm7729-201ENSMUST00000050143 801 ntBASIC13.72□□□□□ -0.21
Sf3b6P59708 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.72□□□□□ -0.21
Sf3b6P59708 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sf3b6P59708 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.72□□□□□ -0.21
Sf3b6P59708 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.72□□□□□ -0.21
Sf3b6P59708 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b6P59708 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.71□□□□□ -0.21
Sf3b6P59708 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sf3b6P59708 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Sf3b6P59708 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.71□□□□□ -0.21
Sf3b6P59708 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sf3b6P59708 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Sf3b6P59708 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Sf3b6P59708 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.71□□□□□ -0.21
Sf3b6P59708 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.71□□□□□ -0.21
Sf3b6P59708 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.71□□□□□ -0.21
Sf3b6P59708 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.71□□□□□ -0.21
Sf3b6P59708 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms