Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.82□□□□□ -0.04
Cdkn2bP55271 Gm17808-201ENSMUST00000200859 894 ntBASIC14.82□□□□□ -0.04
Cdkn2bP55271 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdkn2bP55271 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdkn2bP55271 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.81□□□□□ -0.04
Cdkn2bP55271 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdkn2bP55271 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Gm29518-201ENSMUST00000190858 372 ntBASIC14.8□□□□□ -0.04
Cdkn2bP55271 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Gm9172-201ENSMUST00000212092 954 ntBASIC14.8□□□□□ -0.04
Cdkn2bP55271 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.8□□□□□ -0.04
Cdkn2bP55271 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.8□□□□□ -0.04
Cdkn2bP55271 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdkn2bP55271 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.79□□□□□ -0.04
Cdkn2bP55271 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Gm10231-201ENSMUST00000181584 441 ntBASIC14.79□□□□□ -0.04
Cdkn2bP55271 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Gm10175-202ENSMUST00000208752 441 ntBASIC14.79□□□□□ -0.04
Cdkn2bP55271 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdkn2bP55271 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms