Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.63■□□□□ 0.25
Nub1P54729 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.63■□□□□ 0.25
Nub1P54729 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nub1P54729 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nub1P54729 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nub1P54729 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.62■□□□□ 0.25
Nub1P54729 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.62■□□□□ 0.25
Nub1P54729 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.62■□□□□ 0.25
Nub1P54729 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Nub1P54729 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nub1P54729 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Nub1P54729 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.62■□□□□ 0.25
Nub1P54729 Gm6089-201ENSMUST00000197666 938 ntBASIC16.62■□□□□ 0.25
Nub1P54729 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.62■□□□□ 0.25
Nub1P54729 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nub1P54729 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.62■□□□□ 0.25
Nub1P54729 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nub1P54729 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Nub1P54729 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nub1P54729 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.61■□□□□ 0.25
Nub1P54729 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nub1P54729 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.61■□□□□ 0.25
Nub1P54729 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.61■□□□□ 0.25
Nub1P54729 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.61■□□□□ 0.25
Nub1P54729 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.61■□□□□ 0.25
Nub1P54729 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nub1P54729 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nub1P54729 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Nub1P54729 Gm15358-201ENSMUST00000119249 520 ntBASIC16.6■□□□□ 0.25
Nub1P54729 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Nub1P54729 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.6■□□□□ 0.25
Nub1P54729 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.6■□□□□ 0.25
Nub1P54729 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nub1P54729 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nub1P54729 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nub1P54729 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nub1P54729 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nub1P54729 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nub1P54729 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nub1P54729 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nub1P54729 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nub1P54729 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Nub1P54729 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Nub1P54729 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nub1P54729 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nub1P54729 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Nub1P54729 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.59■□□□□ 0.25
Nub1P54729 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nub1P54729 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms