Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atxn1P54254 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Atxn1P54254 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.32■□□□□ 0.04
Atxn1P54254 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.32■□□□□ 0.04
Atxn1P54254 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Gm45612-201ENSMUST00000211320 160 ntBASIC15.32■□□□□ 0.04
Atxn1P54254 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.32■□□□□ 0.04
Atxn1P54254 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atxn1P54254 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atxn1P54254 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atxn1P54254 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.31■□□□□ 0.04
Atxn1P54254 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Atxn1P54254 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Gm11745-201ENSMUST00000121669 448 ntBASIC15.31■□□□□ 0.04
Atxn1P54254 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.31■□□□□ 0.04
Atxn1P54254 Mir6990-201ENSMUST00000183724 91 ntBASIC15.31■□□□□ 0.04
Atxn1P54254 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.31■□□□□ 0.04
Atxn1P54254 Gm43474-201ENSMUST00000196415 774 ntBASIC15.31■□□□□ 0.04
Atxn1P54254 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Atxn1P54254 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.31■□□□□ 0.04
Atxn1P54254 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Atxn1P54254 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.31■□□□□ 0.04
Atxn1P54254 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Atxn1P54254 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.31■□□□□ 0.04
Atxn1P54254 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atxn1P54254 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.31■□□□□ 0.04
Atxn1P54254 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.31■□□□□ 0.04
Atxn1P54254 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Gm15427-201ENSMUST00000117288 531 ntBASIC15.3■□□□□ 0.04
Atxn1P54254 Gm13597-201ENSMUST00000121239 375 ntBASIC15.3■□□□□ 0.04
Atxn1P54254 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.3■□□□□ 0.04
Atxn1P54254 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.3■□□□□ 0.04
Atxn1P54254 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Atxn1P54254 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Gm5866-201ENSMUST00000177881 973 ntBASIC15.3■□□□□ 0.04
Atxn1P54254 Gm27437-201ENSMUST00000183429 107 ntBASIC15.3■□□□□ 0.04
Atxn1P54254 Gm27622-201ENSMUST00000183779 60 ntBASIC15.3■□□□□ 0.04
Atxn1P54254 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Atxn1P54254 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.3■□□□□ 0.04
Atxn1P54254 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.3■□□□□ 0.04
Atxn1P54254 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.3■□□□□ 0.04
Atxn1P54254 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Atxn1P54254 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atxn1P54254 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Atxn1P54254 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.29■□□□□ 0.04
Atxn1P54254 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.29■□□□□ 0.04
Atxn1P54254 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms