Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Brca1P48754 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Brca1P48754 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.15■□□□□ 0.34
Brca1P48754 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.15■□□□□ 0.34
Brca1P48754 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Brca1P48754 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Brca1P48754 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Brca1P48754 Gm28631-201ENSMUST00000190740 334 ntBASIC17.14■□□□□ 0.34
Brca1P48754 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Brca1P48754 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.14■□□□□ 0.34
Brca1P48754 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Brca1P48754 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Brca1P48754 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.14■□□□□ 0.33
Brca1P48754 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.14■□□□□ 0.33
Brca1P48754 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.14■□□□□ 0.33
Brca1P48754 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.14■□□□□ 0.33
Brca1P48754 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Brca1P48754 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
Brca1P48754 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Gm29667-201ENSMUST00000190817 490 ntBASIC17.14■□□□□ 0.33
Brca1P48754 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.14■□□□□ 0.33
Brca1P48754 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Brca1P48754 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brca1P48754 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Brca1P48754 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.13■□□□□ 0.33
Brca1P48754 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.13■□□□□ 0.33
Brca1P48754 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.13■□□□□ 0.33
Brca1P48754 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brca1P48754 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.13■□□□□ 0.33
Brca1P48754 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.12■□□□□ 0.33
Brca1P48754 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Brca1P48754 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm18766-201ENSMUST00000189811 808 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm2451-201ENSMUST00000199447 999 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm10290-201ENSMUST00000200451 999 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm43703-201ENSMUST00000200523 763 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm18062-201ENSMUST00000208020 547 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm18055-201ENSMUST00000208254 547 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm6180-201ENSMUST00000065243 498 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.12■□□□□ 0.33
Brca1P48754 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Brca1P48754 Gm29310-201ENSMUST00000185468 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21825-201ENSMUST00000185728 696 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms