Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.99□□□□□ -0.17
Rfx3P48381 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfx3P48381 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Gm15794-201ENSMUST00000120182 631 ntBASIC13.99□□□□□ -0.17
Rfx3P48381 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.99□□□□□ -0.17
Rfx3P48381 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.99□□□□□ -0.17
Rfx3P48381 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.99□□□□□ -0.17
Rfx3P48381 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rfx3P48381 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Rfx3P48381 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rfx3P48381 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rfx3P48381 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfx3P48381 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.98□□□□□ -0.17
Rfx3P48381 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rfx3P48381 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rfx3P48381 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfx3P48381 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.97□□□□□ -0.17
Rfx3P48381 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx3P48381 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Rfx3P48381 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rfx3P48381 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx3P48381 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx3P48381 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.97□□□□□ -0.17
Rfx3P48381 Gm13312-201ENSMUST00000119631 718 ntBASIC13.97□□□□□ -0.17
Rfx3P48381 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.97□□□□□ -0.17
Rfx3P48381 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.97□□□□□ -0.17
Rfx3P48381 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.97□□□□□ -0.17
Rfx3P48381 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rfx3P48381 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.97□□□□□ -0.17
Rfx3P48381 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx3P48381 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx3P48381 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx3P48381 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx3P48381 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Sybu-209ENSMUST00000228639 4113 ntBASIC13.96□□□□□ -0.17
Rfx3P48381 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfx3P48381 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rfx3P48381 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfx3P48381 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.96□□□□□ -0.17
Rfx3P48381 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.96□□□□□ -0.17
Rfx3P48381 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.96□□□□□ -0.17
Rfx3P48381 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.96□□□□□ -0.17
Rfx3P48381 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rfx3P48381 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rfx3P48381 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx3P48381 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfx3P48381 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx3P48381 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.96□□□□□ -0.18
Rfx3P48381 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx3P48381 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rfx3P48381 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.95□□□□□ -0.18
Rfx3P48381 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rfx3P48381 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms