Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Nkx2-6P43688 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.61□□□□□ -0.07
Nkx2-6P43688 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.61□□□□□ -0.07
Nkx2-6P43688 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.6□□□□□ -0.07
Nkx2-6P43688 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-6P43688 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-6P43688 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.59□□□□□ -0.07
Nkx2-6P43688 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Gm11025-201ENSMUST00000140773 466 ntBASIC14.59□□□□□ -0.07
Nkx2-6P43688 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-6P43688 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-6P43688 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-6P43688 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-6P43688 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.58□□□□□ -0.07
Nkx2-6P43688 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Gm15920-201ENSMUST00000118998 402 ntBASIC14.58□□□□□ -0.08
Nkx2-6P43688 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Gm17271-201ENSMUST00000165535 355 ntBASIC14.58□□□□□ -0.08
Nkx2-6P43688 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms