Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdx2P43241 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdx2P43241 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdx2P43241 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.64□□□□□ -0.07
Cdx2P43241 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.64□□□□□ -0.07
Cdx2P43241 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.64□□□□□ -0.07
Cdx2P43241 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.64□□□□□ -0.07
Cdx2P43241 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.64□□□□□ -0.07
Cdx2P43241 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.64□□□□□ -0.07
Cdx2P43241 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdx2P43241 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdx2P43241 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cdx2P43241 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Cdx2P43241 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cdx2P43241 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cdx2P43241 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.63□□□□□ -0.07
Cdx2P43241 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cdx2P43241 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Mir6977-201ENSMUST00000184960 64 ntBASIC14.63□□□□□ -0.07
Cdx2P43241 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdx2P43241 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cdx2P43241 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cdx2P43241 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Cdx2P43241 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdx2P43241 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Cdx2P43241 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cdx2P43241 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Cdx2P43241 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cdx2P43241 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cdx2P43241 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Cdx2P43241 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Gm6973-201ENSMUST00000117080 721 ntBASIC14.62□□□□□ -0.07
Cdx2P43241 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.62□□□□□ -0.07
Cdx2P43241 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.62□□□□□ -0.07
Cdx2P43241 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.62□□□□□ -0.07
Cdx2P43241 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdx2P43241 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cdx2P43241 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.61□□□□□ -0.07
Cdx2P43241 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Cdx2P43241 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdx2P43241 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.61□□□□□ -0.07
Cdx2P43241 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.61□□□□□ -0.07
Cdx2P43241 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.61□□□□□ -0.07
Cdx2P43241 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.61□□□□□ -0.07
Cdx2P43241 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cdx2P43241 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdx2P43241 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdx2P43241 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms