Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdh4P39038 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cdh4P39038 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cdh4P39038 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.79□□□□□ -0.04
Cdh4P39038 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdh4P39038 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cdh4P39038 Mir5131-201ENSMUST00000175426 93 ntBASIC14.79□□□□□ -0.04
Cdh4P39038 Gm6550-201ENSMUST00000187574 993 ntBASIC14.79□□□□□ -0.04
Cdh4P39038 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.79□□□□□ -0.04
Cdh4P39038 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdh4P39038 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cdh4P39038 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cdh4P39038 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh4P39038 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cdh4P39038 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Cdh4P39038 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdh4P39038 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdh4P39038 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.78□□□□□ -0.04
Cdh4P39038 Gm2651-201ENSMUST00000203560 838 ntBASIC14.78□□□□□ -0.04
Cdh4P39038 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdh4P39038 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdh4P39038 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdh4P39038 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh4P39038 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh4P39038 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cdh4P39038 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh4P39038 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh4P39038 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cdh4P39038 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh4P39038 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh4P39038 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh4P39038 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
Cdh4P39038 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Cdh4P39038 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh4P39038 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.77□□□□□ -0.05
Cdh4P39038 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh4P39038 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.77□□□□□ -0.05
Cdh4P39038 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh4P39038 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh4P39038 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh4P39038 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Cdh4P39038 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cdh4P39038 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cdh4P39038 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdh4P39038 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cdh4P39038 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Cdh4P39038 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.76□□□□□ -0.05
Cdh4P39038 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.76□□□□□ -0.05
Cdh4P39038 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 AV026068-213ENSMUST00000223675 1171 ntBASIC14.76□□□□□ -0.05
Cdh4P39038 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms