Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Gm11452-201ENSMUST00000122376 690 ntBASIC15.22■□□□□ 0.03
HmgclP38060 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Gm5864-201ENSMUST00000202263 970 ntBASIC15.22■□□□□ 0.03
HmgclP38060 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HmgclP38060 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.22■□□□□ 0.03
HmgclP38060 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HmgclP38060 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HmgclP38060 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.21■□□□□ 0.03
HmgclP38060 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HmgclP38060 Gm28659-201ENSMUST00000188013 759 ntBASIC15.21■□□□□ 0.03
HmgclP38060 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.21■□□□□ 0.03
HmgclP38060 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HmgclP38060 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HmgclP38060 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
HmgclP38060 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.2■□□□□ 0.02
HmgclP38060 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.2■□□□□ 0.02
HmgclP38060 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HmgclP38060 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 BC037039-201ENSMUST00000192003 2205 ntBASIC15.2■□□□□ 0.02
HmgclP38060 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HmgclP38060 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Gm7222-201ENSMUST00000117512 906 ntBASIC15.2■□□□□ 0.02
HmgclP38060 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.2■□□□□ 0.02
HmgclP38060 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.2■□□□□ 0.02
HmgclP38060 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.2■□□□□ 0.02
HmgclP38060 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.2■□□□□ 0.02
HmgclP38060 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HmgclP38060 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.19■□□□□ 0.02
HmgclP38060 Gm13884-201ENSMUST00000118103 829 ntBASIC15.19■□□□□ 0.02
HmgclP38060 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Gm5682-201ENSMUST00000173402 505 ntBASIC15.19■□□□□ 0.02
HmgclP38060 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.19■□□□□ 0.02
HmgclP38060 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HmgclP38060 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 286.9 ms