Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Thbs1P35441 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.28□□□□□ -0.12
Thbs1P35441 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Thbs1P35441 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Thbs1P35441 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Thbs1P35441 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.28□□□□□ -0.12
Thbs1P35441 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.28□□□□□ -0.12
Thbs1P35441 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Thbs1P35441 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Thbs1P35441 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.28□□□□□ -0.12
Thbs1P35441 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Thbs1P35441 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thbs1P35441 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Thbs1P35441 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thbs1P35441 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thbs1P35441 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Thbs1P35441 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.27□□□□□ -0.12
Thbs1P35441 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thbs1P35441 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thbs1P35441 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thbs1P35441 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.27□□□□□ -0.13
Thbs1P35441 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.27□□□□□ -0.13
Thbs1P35441 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.27□□□□□ -0.13
Thbs1P35441 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.27□□□□□ -0.13
Thbs1P35441 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.27□□□□□ -0.13
Thbs1P35441 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Thbs1P35441 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thbs1P35441 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Thbs1P35441 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Thbs1P35441 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Thbs1P35441 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Thbs1P35441 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Gm12644-201ENSMUST00000119935 606 ntBASIC14.26□□□□□ -0.13
Thbs1P35441 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.26□□□□□ -0.13
Thbs1P35441 Gm34391-201ENSMUST00000203706 907 ntBASIC14.26□□□□□ -0.13
Thbs1P35441 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.26□□□□□ -0.13
Thbs1P35441 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.26□□□□□ -0.13
Thbs1P35441 Birc2-201ENSMUST00000054878 378 ntBASIC14.26□□□□□ -0.13
Thbs1P35441 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.26□□□□□ -0.13
Thbs1P35441 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.26□□□□□ -0.13
Thbs1P35441 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.26□□□□□ -0.13
Thbs1P35441 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.26□□□□□ -0.13
Thbs1P35441 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thbs1P35441 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thbs1P35441 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thbs1P35441 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thbs1P35441 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thbs1P35441 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thbs1P35441 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thbs1P35441 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Thbs1P35441 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thbs1P35441 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms