Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc5P32043 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxc5P32043 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxc5P32043 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc5P32043 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc5P32043 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc5P32043 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc5P32043 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc5P32043 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.34□□□□□ -0.11
Hoxc5P32043 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.34□□□□□ -0.11
Hoxc5P32043 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc5P32043 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxc5P32043 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc5P32043 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hoxc5P32043 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc5P32043 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc5P32043 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc5P32043 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc5P32043 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc5P32043 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc5P32043 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc5P32043 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxc5P32043 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.33□□□□□ -0.12
Hoxc5P32043 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc5P32043 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Hoxc5P32043 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxc5P32043 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc5P32043 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.33□□□□□ -0.12
Hoxc5P32043 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.33□□□□□ -0.12
Hoxc5P32043 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Hoxc5P32043 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.33□□□□□ -0.12
Hoxc5P32043 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc5P32043 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxc5P32043 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Hoxc5P32043 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.32□□□□□ -0.12
Hoxc5P32043 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc5P32043 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc5P32043 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms