Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.7■□□□□ 0.42
Vcam1P29533 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.7■□□□□ 0.42
Vcam1P29533 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Vcam1P29533 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Vcam1P29533 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.69■□□□□ 0.42
Vcam1P29533 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.69■□□□□ 0.42
Vcam1P29533 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Vcam1P29533 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.69■□□□□ 0.42
Vcam1P29533 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Vcam1P29533 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcam1P29533 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.68■□□□□ 0.42
Vcam1P29533 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Gm22065-201ENSMUST00000103753 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm22066-201ENSMUST00000103761 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm24932-201ENSMUST00000103763 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm24115-201ENSMUST00000103799 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm22190-201ENSMUST00000103827 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm22191-201ENSMUST00000103831 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm24721-201ENSMUST00000103849 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm28018-201ENSMUST00000103869 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm26399-201ENSMUST00000103937 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm6973-201ENSMUST00000117080 721 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm25349-201ENSMUST00000177728 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm23616-201ENSMUST00000177797 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm25871-201ENSMUST00000177816 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm24752-201ENSMUST00000178240 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm24496-201ENSMUST00000178287 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm25649-201ENSMUST00000178476 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm25548-201ENSMUST00000178681 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm23147-201ENSMUST00000178841 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm26095-201ENSMUST00000179270 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm22171-201ENSMUST00000179283 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm23936-201ENSMUST00000179354 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm22619-201ENSMUST00000179516 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm25255-201ENSMUST00000179579 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm24755-201ENSMUST00000179691 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm26506-201ENSMUST00000179692 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm25086-201ENSMUST00000179931 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm23243-201ENSMUST00000180047 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm24659-201ENSMUST00000180212 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm24169-201ENSMUST00000180244 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm23689-201ENSMUST00000180354 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm27359-201ENSMUST00000184153 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm27785-201ENSMUST00000184268 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm27466-201ENSMUST00000184396 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Gm27703-201ENSMUST00000184836 110 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.68■□□□□ 0.42
Vcam1P29533 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.68■□□□□ 0.42
Vcam1P29533 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.68■□□□□ 0.42
Vcam1P29533 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vcam1P29533 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vcam1P29533 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcam1P29533 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Vcam1P29533 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Vcam1P29533 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Vcam1P29533 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Vcam1P29533 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Gm16026-204ENSMUST00000162652 683 ntBASIC17.67■□□□□ 0.42
Vcam1P29533 AA543401-201ENSMUST00000164248 1269 ntBASIC17.67■□□□□ 0.42
Vcam1P29533 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.67■□□□□ 0.42
Vcam1P29533 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.67■□□□□ 0.42
Vcam1P29533 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 App-207ENSMUST00000227737 2827 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms