Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pde6aP27664 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pde6aP27664 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pde6aP27664 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Pde6aP27664 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.89■□□□□ 0.45
Pde6aP27664 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Pde6aP27664 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Pde6aP27664 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.89■□□□□ 0.45
Pde6aP27664 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.89■□□□□ 0.45
Pde6aP27664 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.89■□□□□ 0.45
Pde6aP27664 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.89■□□□□ 0.45
Pde6aP27664 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Pde6aP27664 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pde6aP27664 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.89■□□□□ 0.45
Pde6aP27664 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.89■□□□□ 0.45
Pde6aP27664 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pde6aP27664 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pde6aP27664 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6aP27664 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.89■□□□□ 0.45
Pde6aP27664 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.88■□□□□ 0.45
Pde6aP27664 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.88■□□□□ 0.45
Pde6aP27664 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.88■□□□□ 0.45
Pde6aP27664 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pde6aP27664 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.88■□□□□ 0.45
Pde6aP27664 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.88■□□□□ 0.45
Pde6aP27664 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Pde6aP27664 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pde6aP27664 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Pde6aP27664 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6aP27664 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.87■□□□□ 0.45
Pde6aP27664 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.87■□□□□ 0.45
Pde6aP27664 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.87■□□□□ 0.45
Pde6aP27664 Gm10499-201ENSMUST00000174094 934 ntBASIC17.87■□□□□ 0.45
Pde6aP27664 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.87■□□□□ 0.45
Pde6aP27664 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.87■□□□□ 0.45
Pde6aP27664 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pde6aP27664 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pde6aP27664 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.87■□□□□ 0.45
Pde6aP27664 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 BC037039-201ENSMUST00000192003 2205 ntBASIC17.87■□□□□ 0.45
Pde6aP27664 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.87■□□□□ 0.45
Pde6aP27664 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6aP27664 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pde6aP27664 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pde6aP27664 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pde6aP27664 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Pde6aP27664 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.86■□□□□ 0.45
Pde6aP27664 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.86■□□□□ 0.45
Pde6aP27664 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pde6aP27664 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6aP27664 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6aP27664 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms