Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Col8a2P25318 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.9□□□□□ -0.34
Col8a2P25318 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Gm9727-201ENSMUST00000161387 555 ntBASIC12.9□□□□□ -0.34
Col8a2P25318 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col8a2P25318 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.9□□□□□ -0.34
Col8a2P25318 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.9□□□□□ -0.34
Col8a2P25318 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.9□□□□□ -0.34
Col8a2P25318 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.9□□□□□ -0.34
Col8a2P25318 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.9□□□□□ -0.34
Col8a2P25318 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col8a2P25318 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.9□□□□□ -0.34
Col8a2P25318 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col8a2P25318 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col8a2P25318 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col8a2P25318 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col8a2P25318 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col8a2P25318 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.89□□□□□ -0.35
Col8a2P25318 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Gm15467-201ENSMUST00000120582 445 ntBASIC12.89□□□□□ -0.35
Col8a2P25318 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.89□□□□□ -0.35
Col8a2P25318 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Gm17968-201ENSMUST00000194902 784 ntBASIC12.89□□□□□ -0.35
Col8a2P25318 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.89□□□□□ -0.35
Col8a2P25318 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.89□□□□□ -0.35
Col8a2P25318 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.89□□□□□ -0.35
Col8a2P25318 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col8a2P25318 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col8a2P25318 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.89□□□□□ -0.35
Col8a2P25318 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col8a2P25318 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col8a2P25318 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col8a2P25318 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col8a2P25318 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.88□□□□□ -0.35
Col8a2P25318 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.88□□□□□ -0.35
Col8a2P25318 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.88□□□□□ -0.35
Col8a2P25318 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.88□□□□□ -0.35
Col8a2P25318 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col8a2P25318 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Col8a2P25318 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Gm5867-201ENSMUST00000063197 592 ntBASIC12.88□□□□□ -0.35
Col8a2P25318 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col8a2P25318 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col8a2P25318 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col8a2P25318 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col8a2P25318 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms