Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf1aP25118 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm7284-201ENSMUST00000131667 944 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm8825-201ENSMUST00000182565 998 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm4518-201ENSMUST00000182638 718 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf1aP25118 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf1aP25118 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Gm14859-201ENSMUST00000117752 357 ntBASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Gm33142-201ENSMUST00000193913 867 ntBASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf1aP25118 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms