Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf9P20334 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf9P20334 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf9P20334 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf9P20334 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf9P20334 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tnfrsf9P20334 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Tnfrsf9P20334 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tnfrsf9P20334 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tnfrsf9P20334 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Tnfrsf9P20334 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Gm27628-201ENSMUST00000184911 107 ntBASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Gm6550-201ENSMUST00000187574 993 ntBASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf9P20334 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 AV026068-213ENSMUST00000223675 1171 ntBASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.63□□□□□ -0.39
Tnfrsf9P20334 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfrsf9P20334 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfrsf9P20334 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms