Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hmgn1P18608 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hmgn1P18608 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Hmgn1P18608 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hmgn1P18608 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Efs-202ENSMUST00000227037 2540 ntBASIC14.15□□□□□ -0.14
Hmgn1P18608 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmgn1P18608 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn1P18608 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hmgn1P18608 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn1P18608 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn1P18608 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgn1P18608 Gm22697-201ENSMUST00000175194 63 ntBASIC14.14□□□□□ -0.15
Hmgn1P18608 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn1P18608 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.14□□□□□ -0.15
Hmgn1P18608 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.14□□□□□ -0.15
Hmgn1P18608 Gm18101-201ENSMUST00000215769 548 ntBASIC14.14□□□□□ -0.15
Hmgn1P18608 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn1P18608 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hmgn1P18608 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Hmgn1P18608 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hmgn1P18608 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Hmgn1P18608 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Gm14722-201ENSMUST00000118943 689 ntBASIC14.13□□□□□ -0.15
Hmgn1P18608 Gm12134-201ENSMUST00000122109 520 ntBASIC14.13□□□□□ -0.15
Hmgn1P18608 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.13□□□□□ -0.15
Hmgn1P18608 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.13□□□□□ -0.15
Hmgn1P18608 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Hmgn1P18608 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn1P18608 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hmgn1P18608 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Hmgn1P18608 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn1P18608 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn1P18608 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn1P18608 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn1P18608 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn1P18608 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn1P18608 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Hmgn1P18608 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn1P18608 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn1P18608 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms