Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd48P18181 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cd48P18181 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd48P18181 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd48P18181 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cd48P18181 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd48P18181 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd48P18181 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd48P18181 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd48P18181 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd48P18181 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd48P18181 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.9□□□□□ -0.19
Cd48P18181 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cd48P18181 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cd48P18181 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.89□□□□□ -0.19
Cd48P18181 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cd48P18181 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cd48P18181 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Gm13312-201ENSMUST00000119631 718 ntBASIC13.89□□□□□ -0.19
Cd48P18181 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Rprl3-201ENSMUST00000157400 290 ntBASIC13.89□□□□□ -0.19
Cd48P18181 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.89□□□□□ -0.19
Cd48P18181 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.89□□□□□ -0.19
Cd48P18181 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd48P18181 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cd48P18181 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.88□□□□□ -0.19
Cd48P18181 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.88□□□□□ -0.19
Cd48P18181 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd48P18181 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.87□□□□□ -0.19
Cd48P18181 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cd48P18181 AA414768-201ENSMUST00000121924 1257 ntBASIC13.87□□□□□ -0.19
Cd48P18181 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Cd48P18181 Gm29518-201ENSMUST00000190858 372 ntBASIC13.87□□□□□ -0.19
Cd48P18181 Gm17808-201ENSMUST00000200859 894 ntBASIC13.87□□□□□ -0.19
Cd48P18181 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.87□□□□□ -0.19
Cd48P18181 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Cd48P18181 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cd48P18181 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cd48P18181 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd48P18181 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms