Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cntn1P12960 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Gm15467-201ENSMUST00000120582 445 ntBASIC14.82□□□□□ -0.04
Cntn1P12960 Gm9727-201ENSMUST00000161387 555 ntBASIC14.82□□□□□ -0.04
Cntn1P12960 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.82□□□□□ -0.04
Cntn1P12960 Gm4899-201ENSMUST00000178708 719 ntBASIC14.82□□□□□ -0.04
Cntn1P12960 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.82□□□□□ -0.04
Cntn1P12960 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.82□□□□□ -0.04
Cntn1P12960 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.82□□□□□ -0.04
Cntn1P12960 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.82□□□□□ -0.04
Cntn1P12960 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.82□□□□□ -0.04
Cntn1P12960 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cntn1P12960 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.82□□□□□ -0.04
Cntn1P12960 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.82□□□□□ -0.04
Cntn1P12960 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cntn1P12960 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.82□□□□□ -0.04
Cntn1P12960 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.82□□□□□ -0.04
Cntn1P12960 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cntn1P12960 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.81□□□□□ -0.04
Cntn1P12960 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Cntn1P12960 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.81□□□□□ -0.04
Cntn1P12960 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.81□□□□□ -0.04
Cntn1P12960 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cntn1P12960 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cntn1P12960 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cntn1P12960 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.81□□□□□ -0.04
Cntn1P12960 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cntn1P12960 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cntn1P12960 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cntn1P12960 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.8□□□□□ -0.04
Cntn1P12960 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.8□□□□□ -0.04
Cntn1P12960 Gm9682-201ENSMUST00000197505 556 ntBASIC14.8□□□□□ -0.04
Cntn1P12960 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.8□□□□□ -0.04
Cntn1P12960 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
Cntn1P12960 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cntn1P12960 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.8□□□□□ -0.04
Cntn1P12960 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.8□□□□□ -0.04
Cntn1P12960 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Cntn1P12960 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cntn1P12960 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms