Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.96□□□□□ -0.02
Fv4P11370 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Fv4P11370 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.96□□□□□ -0.02
Fv4P11370 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Fv4P11370 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Fv4P11370 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.96□□□□□ -0.02
Fv4P11370 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Fv4P11370 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Fv4P11370 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Fv4P11370 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Fv4P11370 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.95□□□□□ -0.02
Fv4P11370 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Gm18622-201ENSMUST00000219361 595 ntBASIC14.95□□□□□ -0.02
Fv4P11370 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.95□□□□□ -0.02
Fv4P11370 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.95□□□□□ -0.02
Fv4P11370 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Fv4P11370 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Fv4P11370 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.95□□□□□ -0.02
Fv4P11370 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.95□□□□□ -0.02
Fv4P11370 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fv4P11370 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Fv4P11370 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.94□□□□□ -0.02
Fv4P11370 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.94□□□□□ -0.02
Fv4P11370 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Fv4P11370 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Gm8344-201ENSMUST00000119813 856 ntBASIC14.94□□□□□ -0.02
Fv4P11370 Gm15372-201ENSMUST00000120729 834 ntBASIC14.94□□□□□ -0.02
Fv4P11370 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.94□□□□□ -0.02
Fv4P11370 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.94□□□□□ -0.02
Fv4P11370 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Fv4P11370 Gm27867-201ENSMUST00000184778 125 ntBASIC14.94□□□□□ -0.02
Fv4P11370 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.94□□□□□ -0.02
Fv4P11370 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.94□□□□□ -0.02
Fv4P11370 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Fv4P11370 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.94□□□□□ -0.02
Fv4P11370 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.94□□□□□ -0.02
Fv4P11370 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fv4P11370 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.94□□□□□ -0.02
Fv4P11370 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Fv4P11370 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.93□□□□□ -0.02
Fv4P11370 Gm4459-201ENSMUST00000118750 468 ntBASIC14.93□□□□□ -0.02
Fv4P11370 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Fv4P11370 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Fv4P11370 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.93□□□□□ -0.02
Fv4P11370 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.93□□□□□ -0.02
Fv4P11370 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Fv4P11370 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fv4P11370 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms