Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccl3P10855 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccl3P10855 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.61□□□□□ -0.23
Ccl3P10855 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccl3P10855 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccl3P10855 Gm5779-201ENSMUST00000218467 910 ntBASIC13.61□□□□□ -0.23
Ccl3P10855 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccl3P10855 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ccl3P10855 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.61□□□□□ -0.23
Ccl3P10855 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl3P10855 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccl3P10855 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccl3P10855 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccl3P10855 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ccl3P10855 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Gm6973-201ENSMUST00000117080 721 ntBASIC13.6□□□□□ -0.23
Ccl3P10855 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Ccl3P10855 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccl3P10855 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccl3P10855 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccl3P10855 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccl3P10855 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccl3P10855 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl3P10855 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccl3P10855 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccl3P10855 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccl3P10855 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Ccl3P10855 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccl3P10855 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.59□□□□□ -0.23
Ccl3P10855 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccl3P10855 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
Ccl3P10855 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccl3P10855 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.59□□□□□ -0.23
Ccl3P10855 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccl3P10855 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.59□□□□□ -0.23
Ccl3P10855 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccl3P10855 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccl3P10855 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccl3P10855 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccl3P10855 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl3P10855 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Ccl3P10855 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms