Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Calm3P0DP28 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Calm3P0DP28 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Calm3P0DP28 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Calm3P0DP28 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Calm3P0DP28 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Calm3P0DP28 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.78■□□□□ 0.44
Calm3P0DP28 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.78■□□□□ 0.44
Calm3P0DP28 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.78■□□□□ 0.44
Calm3P0DP28 Gm45167-201ENSMUST00000208007 322 ntBASIC17.78■□□□□ 0.44
Calm3P0DP28 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Calm3P0DP28 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Calm3P0DP28 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Calm3P0DP28 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.77■□□□□ 0.44
Calm3P0DP28 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 Gm27628-201ENSMUST00000184911 107 ntBASIC17.77■□□□□ 0.44
Calm3P0DP28 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.77■□□□□ 0.44
Calm3P0DP28 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.77■□□□□ 0.44
Calm3P0DP28 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
Calm3P0DP28 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.77■□□□□ 0.44
Calm3P0DP28 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.77■□□□□ 0.44
Calm3P0DP28 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Calm3P0DP28 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Calm3P0DP28 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Calm3P0DP28 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Calm3P0DP28 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Calm3P0DP28 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Calm3P0DP28 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Calm3P0DP28 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.76■□□□□ 0.43
Calm3P0DP28 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.76■□□□□ 0.43
Calm3P0DP28 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Calm3P0DP28 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Calm3P0DP28 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Calm3P0DP28 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Calm3P0DP28 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Calm3P0DP28 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Calm3P0DP28 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Calm3P0DP28 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.75■□□□□ 0.43
Calm3P0DP28 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms