Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm13884-201ENSMUST00000118103 829 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm6257-201ENSMUST00000163864 910 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.84■□□□□ 0.29
Chmp6P0C0A3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp6P0C0A3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Chmp6P0C0A3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp6P0C0A3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Grk6-207ENSMUST00000225925 2769 ntBASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp6P0C0A3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Asic1-205ENSMUST00000228185 1818 ntBASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Gm6296-201ENSMUST00000222599 943 ntBASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp6P0C0A3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp6P0C0A3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms