Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Gm45328-201ENSMUST00000210942 917 ntBASIC12.54□□□□□ -0.4
P06323 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P06323 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P06323 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P06323 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
P06323 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
P06323 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06323 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P06323 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.53□□□□□ -0.4
P06323 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.53□□□□□ -0.4
P06323 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.53□□□□□ -0.4
P06323 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
P06323 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
P06323 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06323 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06323 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P06323 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06323 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06323 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
P06323 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P06323 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06323 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06323 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06323 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.52□□□□□ -0.4
P06323 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
P06323 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.52□□□□□ -0.41
P06323 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.52□□□□□ -0.41
P06323 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P06323 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06323 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P06323 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.51□□□□□ -0.41
P06323 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06323 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06323 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P06323 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06323 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06323 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P06323 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms