Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm8318-201ENSMUST00000182954 872 ntBASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Birc2-201ENSMUST00000054878 378 ntBASIC13.37□□□□□ -0.27
Igh-VJ558P01758 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Gm10355-201ENSMUST00000097146 517 ntBASIC13.37□□□□□ -0.27
Igh-VJ558P01758 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igh-VJ558P01758 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igh-VJ558P01758 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igh-VJ558P01758 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igh-VJ558P01758 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms