Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.79■□□□□ 0.28
P01734 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Gm8318-201ENSMUST00000182954 872 ntBASIC16.79■□□□□ 0.28
P01734 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.79■□□□□ 0.28
P01734 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
P01734 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
P01734 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
P01734 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
P01734 Dancr-204ENSMUST00000132389 2347 ntBASIC16.79■□□□□ 0.28
P01734 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01734 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.79■□□□□ 0.28
P01734 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.78■□□□□ 0.28
P01734 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
P01734 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
P01734 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
P01734 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
P01734 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.78■□□□□ 0.28
P01734 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.78■□□□□ 0.28
P01734 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.78■□□□□ 0.28
P01734 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.78■□□□□ 0.28
P01734 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
P01734 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.78■□□□□ 0.28
P01734 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
P01734 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
P01734 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01734 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01734 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.77■□□□□ 0.28
P01734 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.77■□□□□ 0.28
P01734 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.77■□□□□ 0.28
P01734 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.77■□□□□ 0.28
P01734 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P01734 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.77■□□□□ 0.28
P01734 Gm27300-201ENSMUST00000184085 97 ntBASIC16.77■□□□□ 0.28
P01734 Gm27335-201ENSMUST00000184758 97 ntBASIC16.77■□□□□ 0.28
P01734 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P01734 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.77■□□□□ 0.28
P01734 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01734 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01734 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.77■□□□□ 0.28
P01734 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.77■□□□□ 0.27
P01734 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01734 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.77■□□□□ 0.27
P01734 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01734 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01734 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
P01734 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
P01734 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.76■□□□□ 0.27
P01734 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.76■□□□□ 0.27
P01734 Gm12260-201ENSMUST00000122447 411 ntBASIC16.76■□□□□ 0.27
P01734 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.76■□□□□ 0.27
P01734 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.76■□□□□ 0.27
P01734 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01734 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms