Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sp1O89090 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sp1O89090 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sp1O89090 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Sp1O89090 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sp1O89090 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.58■□□□□ 0.08
Sp1O89090 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sp1O89090 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sp1O89090 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sp1O89090 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sp1O89090 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sp1O89090 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.57■□□□□ 0.08
Sp1O89090 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.57■□□□□ 0.08
Sp1O89090 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sp1O89090 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 Gm6736-201ENSMUST00000166583 948 ntBASIC15.57■□□□□ 0.08
Sp1O89090 Gm43575-201ENSMUST00000196420 516 ntBASIC15.57■□□□□ 0.08
Sp1O89090 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Sp1O89090 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Sp1O89090 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.57■□□□□ 0.08
Sp1O89090 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp1O89090 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Sp1O89090 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Sp1O89090 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.56■□□□□ 0.08
Sp1O89090 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Sp1O89090 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Sp1O89090 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Gm17271-201ENSMUST00000165535 355 ntBASIC15.56■□□□□ 0.08
Sp1O89090 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.56■□□□□ 0.08
Sp1O89090 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.56■□□□□ 0.08
Sp1O89090 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.56■□□□□ 0.08
Sp1O89090 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.56■□□□□ 0.08
Sp1O89090 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp1O89090 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sp1O89090 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.55■□□□□ 0.08
Sp1O89090 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sp1O89090 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Sp1O89090 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.55■□□□□ 0.08
Sp1O89090 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.55■□□□□ 0.08
Sp1O89090 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.55■□□□□ 0.08
Sp1O89090 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.55■□□□□ 0.08
Sp1O89090 Gm12008-201ENSMUST00000117791 755 ntBASIC15.55■□□□□ 0.08
Sp1O89090 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sp1O89090 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp1O89090 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sp1O89090 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.54■□□□□ 0.08
Sp1O89090 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sp1O89090 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp1O89090 Gm23935-201ENSMUST00000102303 57 ntBASIC15.54■□□□□ 0.08
Sp1O89090 Gm24270-201ENSMUST00000102326 57 ntBASIC15.54■□□□□ 0.08
Sp1O89090 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.54■□□□□ 0.08
Sp1O89090 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.54■□□□□ 0.08
Sp1O89090 Gm24245-201ENSMUST00000157318 57 ntBASIC15.54■□□□□ 0.08
Sp1O89090 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp1O89090 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sp1O89090 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Sp1O89090 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sp1O89090 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp1O89090 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sp1O89090 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp1O89090 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.53■□□□□ 0.08
Sp1O89090 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp1O89090 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.53■□□□□ 0.08
Sp1O89090 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms