Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Matn4O89029 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.61□□□□□ -0.07
Matn4O89029 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Matn4O89029 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Matn4O89029 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.6□□□□□ -0.07
Matn4O89029 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.6□□□□□ -0.07
Matn4O89029 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.6□□□□□ -0.07
Matn4O89029 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Matn4O89029 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.6□□□□□ -0.07
Matn4O89029 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Matn4O89029 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Matn4O89029 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.59□□□□□ -0.07
Matn4O89029 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.59□□□□□ -0.07
Matn4O89029 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Matn4O89029 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Matn4O89029 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Matn4O89029 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Matn4O89029 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Matn4O89029 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Matn4O89029 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.58□□□□□ -0.08
Matn4O89029 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.58□□□□□ -0.08
Matn4O89029 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.58□□□□□ -0.08
Matn4O89029 Gm9172-201ENSMUST00000212092 954 ntBASIC14.58□□□□□ -0.08
Matn4O89029 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.58□□□□□ -0.08
Matn4O89029 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.58□□□□□ -0.08
Matn4O89029 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.58□□□□□ -0.08
Matn4O89029 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Matn4O89029 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms