Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Olfr129-201ENSMUST00000122318 993 ntBASIC10.96□□□□□ -0.65
Sh2d1aO88890 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Gm27742-201ENSMUST00000184667 60 ntBASIC10.96□□□□□ -0.65
Sh2d1aO88890 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.96□□□□□ -0.65
Sh2d1aO88890 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh2d1aO88890 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh2d1aO88890 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.95□□□□□ -0.66
Sh2d1aO88890 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.95□□□□□ -0.66
Sh2d1aO88890 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Grk6-207ENSMUST00000225925 2769 ntBASIC10.95□□□□□ -0.66
Sh2d1aO88890 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh2d1aO88890 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Mir6404-201ENSMUST00000183699 94 ntBASIC10.94□□□□□ -0.66
Sh2d1aO88890 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms