Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm13597-201ENSMUST00000121239 375 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.24□□□□□ -0.29
Cldn1O88551 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm8825-201ENSMUST00000182565 998 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm4518-201ENSMUST00000182638 718 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.24□□□□□ -0.29
Cldn1O88551 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cldn1O88551 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.24□□□□□ -0.29
Cldn1O88551 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cldn1O88551 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cldn1O88551 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.23□□□□□ -0.29
Cldn1O88551 Gm13216-201ENSMUST00000117145 591 ntBASIC13.23□□□□□ -0.29
Cldn1O88551 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Gm44335-201ENSMUST00000196879 141 ntBASIC13.23□□□□□ -0.29
Cldn1O88551 Gm44297-201ENSMUST00000198304 141 ntBASIC13.23□□□□□ -0.29
Cldn1O88551 Gm44346-201ENSMUST00000198851 141 ntBASIC13.23□□□□□ -0.29
Cldn1O88551 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.23□□□□□ -0.29
Cldn1O88551 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldn1O88551 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Cldn1O88551 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Gm5745-201ENSMUST00000183748 313 ntBASIC13.22□□□□□ -0.29
Cldn1O88551 Gm5312-201ENSMUST00000203728 547 ntBASIC13.22□□□□□ -0.29
Cldn1O88551 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cldn1O88551 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.22□□□□□ -0.29
Cldn1O88551 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Cldn1O88551 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cldn1O88551 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldn1O88551 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.21□□□□□ -0.29
Cldn1O88551 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms