Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.81■□□□□ 0.6
Cops6O88545 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cops6O88545 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops6O88545 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops6O88545 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cops6O88545 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops6O88545 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.8■□□□□ 0.6
Cops6O88545 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.8■□□□□ 0.6
Cops6O88545 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cops6O88545 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cops6O88545 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cops6O88545 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cops6O88545 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cops6O88545 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.8■□□□□ 0.6
Cops6O88545 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cops6O88545 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cops6O88545 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Cops6O88545 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Cops6O88545 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cops6O88545 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cops6O88545 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.79■□□□□ 0.6
Cops6O88545 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.79■□□□□ 0.6
Cops6O88545 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.79■□□□□ 0.6
Cops6O88545 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.79■□□□□ 0.6
Cops6O88545 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.79■□□□□ 0.6
Cops6O88545 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cops6O88545 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.79■□□□□ 0.6
Cops6O88545 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.79■□□□□ 0.6
Cops6O88545 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.79■□□□□ 0.6
Cops6O88545 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cops6O88545 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops6O88545 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cops6O88545 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.78■□□□□ 0.6
Cops6O88545 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.78■□□□□ 0.6
Cops6O88545 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cops6O88545 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.78■□□□□ 0.6
Cops6O88545 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Gm43125-201ENSMUST00000201724 730 ntBASIC18.78■□□□□ 0.6
Cops6O88545 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Cops6O88545 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cops6O88545 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cops6O88545 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops6O88545 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Cops6O88545 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cops6O88545 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.77■□□□□ 0.6
Cops6O88545 Gm18057-201ENSMUST00000208220 503 ntBASIC18.77■□□□□ 0.6
Cops6O88545 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.77■□□□□ 0.6
Cops6O88545 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.77■□□□□ 0.6
Cops6O88545 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops6O88545 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms