Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.86□□□□□ -0.19
Cops3O88543 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Cops3O88543 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops3O88543 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.86□□□□□ -0.19
Cops3O88543 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cops3O88543 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cops3O88543 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cops3O88543 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Cops3O88543 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cops3O88543 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cops3O88543 Gm10013-201ENSMUST00000106074 672 ntBASIC13.85□□□□□ -0.19
Cops3O88543 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Gm6345-202ENSMUST00000180900 204 ntBASIC13.85□□□□□ -0.19
Cops3O88543 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.85□□□□□ -0.19
Cops3O88543 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.85□□□□□ -0.19
Cops3O88543 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.85□□□□□ -0.19
Cops3O88543 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cops3O88543 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Cops3O88543 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops3O88543 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Cops3O88543 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.84□□□□□ -0.19
Cops3O88543 Gm9013-201ENSMUST00000132939 882 ntBASIC13.84□□□□□ -0.19
Cops3O88543 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.84□□□□□ -0.19
Cops3O88543 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Gm7367-201ENSMUST00000057611 492 ntBASIC13.84□□□□□ -0.19
Cops3O88543 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cops3O88543 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cops3O88543 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cops3O88543 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.84□□□□□ -0.19
Cops3O88543 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cops3O88543 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.84□□□□□ -0.19
Cops3O88543 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops3O88543 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cops3O88543 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cops3O88543 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cops3O88543 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.83□□□□□ -0.19
Cops3O88543 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.83□□□□□ -0.2
Cops3O88543 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.83□□□□□ -0.2
Cops3O88543 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.83□□□□□ -0.2
Cops3O88543 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cops3O88543 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cops3O88543 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.83□□□□□ -0.2
Cops3O88543 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.83□□□□□ -0.2
Cops3O88543 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms