Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf17O88472 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Gm14767-201ENSMUST00000121559 586 ntBASIC14.31□□□□□ -0.12
Tnfrsf17O88472 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.31□□□□□ -0.12
Tnfrsf17O88472 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfrsf17O88472 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Gm18737-201ENSMUST00000173594 937 ntBASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Gm38225-201ENSMUST00000194001 393 ntBASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfrsf17O88472 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfrsf17O88472 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms