Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Gm4984-201ENSMUST00000115987 360 ntBASIC14.93□□□□□ -0.02
Cacna1hO88427 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cacna1hO88427 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.93□□□□□ -0.02
Cacna1hO88427 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.93□□□□□ -0.02
Cacna1hO88427 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.93□□□□□ -0.02
Cacna1hO88427 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.93□□□□□ -0.02
Cacna1hO88427 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cacna1hO88427 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cacna1hO88427 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.93□□□□□ -0.02
Cacna1hO88427 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1hO88427 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cacna1hO88427 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.93□□□□□ -0.02
Cacna1hO88427 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Gm5566-201ENSMUST00000116118 459 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Snora78-201ENSMUST00000158630 128 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Gm21854-201ENSMUST00000179901 471 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 Gm37917-201ENSMUST00000194711 392 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Gm15483-201ENSMUST00000120338 456 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 Gm16026-204ENSMUST00000162652 683 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Gm28760-201ENSMUST00000185995 736 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Gm45784-201ENSMUST00000188360 142 ntBASIC14.92□□□□□ -0.02
Cacna1hO88427 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1hO88427 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cacna1hO88427 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cacna1hO88427 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Cacna1hO88427 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cacna1hO88427 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cacna1hO88427 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.91□□□□□ -0.02
Cacna1hO88427 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.91□□□□□ -0.02
Cacna1hO88427 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacna1hO88427 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
Cacna1hO88427 Gm38241-201ENSMUST00000192641 898 ntBASIC14.91□□□□□ -0.02
Cacna1hO88427 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacna1hO88427 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms