Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.65□□□□□ -0.06
Tgfbr3O88393 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.65□□□□□ -0.06
Tgfbr3O88393 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.65□□□□□ -0.06
Tgfbr3O88393 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.64□□□□□ -0.07
Tgfbr3O88393 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.64□□□□□ -0.07
Tgfbr3O88393 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.64□□□□□ -0.07
Tgfbr3O88393 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Gm10499-201ENSMUST00000174094 934 ntBASIC14.64□□□□□ -0.07
Tgfbr3O88393 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Gm2272-201ENSMUST00000194903 582 ntBASIC14.64□□□□□ -0.07
Tgfbr3O88393 Gm7774-201ENSMUST00000200064 533 ntBASIC14.64□□□□□ -0.07
Tgfbr3O88393 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tgfbr3O88393 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.63□□□□□ -0.07
Tgfbr3O88393 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.63□□□□□ -0.07
Tgfbr3O88393 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.63□□□□□ -0.07
Tgfbr3O88393 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.63□□□□□ -0.07
Tgfbr3O88393 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Tgfbr3O88393 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.63□□□□□ -0.07
Tgfbr3O88393 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tgfbr3O88393 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tgfbr3O88393 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tgfbr3O88393 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.62□□□□□ -0.07
Tgfbr3O88393 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tgfbr3O88393 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tgfbr3O88393 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tgfbr3O88393 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tgfbr3O88393 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm22065-201ENSMUST00000103753 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm22066-201ENSMUST00000103761 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm24932-201ENSMUST00000103763 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm24115-201ENSMUST00000103799 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm22190-201ENSMUST00000103827 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm22191-201ENSMUST00000103831 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm24721-201ENSMUST00000103849 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm28018-201ENSMUST00000103869 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm26399-201ENSMUST00000103937 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm25349-201ENSMUST00000177728 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm23616-201ENSMUST00000177797 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm25871-201ENSMUST00000177816 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm24752-201ENSMUST00000178240 110 ntBASIC14.62□□□□□ -0.07
Tgfbr3O88393 Gm24496-201ENSMUST00000178287 110 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms