Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cfdp1O88271 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.24■□□□□ 0.67
Cfdp1O88271 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfdp1O88271 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cfdp1O88271 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cfdp1O88271 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfdp1O88271 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.24■□□□□ 0.67
Cfdp1O88271 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfdp1O88271 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfdp1O88271 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfdp1O88271 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cfdp1O88271 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cfdp1O88271 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.23■□□□□ 0.67
Cfdp1O88271 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.23■□□□□ 0.67
Cfdp1O88271 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.23■□□□□ 0.67
Cfdp1O88271 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfdp1O88271 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.22■□□□□ 0.67
Cfdp1O88271 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.22■□□□□ 0.67
Cfdp1O88271 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.22■□□□□ 0.67
Cfdp1O88271 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.22■□□□□ 0.67
Cfdp1O88271 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.22■□□□□ 0.67
Cfdp1O88271 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfdp1O88271 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.21■□□□□ 0.67
Cfdp1O88271 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.21■□□□□ 0.67
Cfdp1O88271 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Cfdp1O88271 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cfdp1O88271 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Cfdp1O88271 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cfdp1O88271 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfdp1O88271 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.21■□□□□ 0.67
Cfdp1O88271 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.2■□□□□ 0.66
Cfdp1O88271 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Cfdp1O88271 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Cfdp1O88271 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cfdp1O88271 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.2■□□□□ 0.66
Cfdp1O88271 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfdp1O88271 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Cfdp1O88271 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.19■□□□□ 0.66
Cfdp1O88271 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfdp1O88271 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfdp1O88271 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cfdp1O88271 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfdp1O88271 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cfdp1O88271 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms