Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.81■□□□□ 0.6
Mmp8O70138 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Mmp8O70138 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Mmp8O70138 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.81■□□□□ 0.6
Mmp8O70138 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.81■□□□□ 0.6
Mmp8O70138 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.81■□□□□ 0.6
Mmp8O70138 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Mmp8O70138 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp8O70138 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.81■□□□□ 0.6
Mmp8O70138 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Mmp8O70138 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.8■□□□□ 0.6
Mmp8O70138 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp8O70138 Gm7787-201ENSMUST00000216858 688 ntBASIC18.8■□□□□ 0.6
Mmp8O70138 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.8■□□□□ 0.6
Mmp8O70138 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Mmp8O70138 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Mmp8O70138 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp8O70138 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Mmp8O70138 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Mmp8O70138 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mmp8O70138 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.79■□□□□ 0.6
Mmp8O70138 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.79■□□□□ 0.6
Mmp8O70138 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.79■□□□□ 0.6
Mmp8O70138 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mmp8O70138 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mmp8O70138 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Mmp8O70138 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.79■□□□□ 0.6
Mmp8O70138 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mmp8O70138 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp8O70138 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.78■□□□□ 0.6
Mmp8O70138 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Gm27300-201ENSMUST00000184085 97 ntBASIC18.78■□□□□ 0.6
Mmp8O70138 Gm27335-201ENSMUST00000184758 97 ntBASIC18.78■□□□□ 0.6
Mmp8O70138 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.78■□□□□ 0.6
Mmp8O70138 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.78■□□□□ 0.6
Mmp8O70138 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp8O70138 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Mmp8O70138 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms